AAV Manufacturing
Process Development
Every AAV gene therapy program presents unique technical demands. We help you determine the right path forward, whether that’s accelerating progress through targeted optimization within our FUEL™ platform or pursuing fully customized upstream and downstream development to deliver on specific program goals.
Our AAV Process Development Capabilities
With deep experience across natural and novel AAV serotypes and a broad range of indications, we’ve mapped over 50 upstream and downstream studies to help optimize yield, purity, and recovery. Whether the priority is efficiency, scalability, or product quality, every strategy is thoughtfully designed with time, cost, and long-term impact in mind.
Upstream Process Development
Upstream process development focuses on optimizing vector production in cell culture while establishing parameters that scale reliably into cGMP manufacturing, with design-of-experiments (DoE) approaches used to systematically evaluate and refine critical process variables.
Key Upstream Process Development Capabilities
- Cell culture and media optimization
- Transient transfection DoE strategy development
- Plasmid ratio and DNA input optimization
- Cell density and growth evaluation
- Reagent ratio and process condition optimization
- Harvest timing optimization
- Scale-down modeling to support scale-up

Downstream Process Development
Downstream development focuses on purifying AAV vectors while maintaining capsid integrity and maximizing recovery, with DoE approaches used to systematically evaluate and refine process parameters for different serotypes and transgenes.
Key Downstream Process Development Capabilities
- Harvest clarification optimization
- Affinity chromatography resin screening and optimization
- Anion exchange chromatography process development
- CsCl full enrichment optimization
- Final product concentration analysis and feasibility studies
- Formulation evaluation


Infrastructure Built for Scalable Process Development
Our process development labs are equipped with high-throughput and scalable systems that allow us to rapidly screen conditions, generate robust datasets, and design processes that translate efficiently to cGMP manufacturing.
Integrated Analytical Development
Analytics are embedded throughout process development to enable data-driven decisions and a clear understanding of product quality and process performance. Establishing robust analytical strategies early in development is critical to building a scalable, well-characterized process.
• Guiding Optimization
Evaluate the impact of process changes on yield, purity, and consistency to inform development decisions.
• Defining Product Quality
Characterize critical quality attributes (CQAs), including titer, potency, capsid integrity, and impurity profiles.
• Enabling Process Understanding
Support DoE studies by quantifying parameter effects, identifying interactions, and defining optimal conditions.
• Supporting Scale-Up and Transfer
Confirm comparability across scales and ensure product quality is maintained through tech transfer and GMP readiness.
• Comprehensive and Flexible Assay Coverage
All analytics available in-house at Forge can be applied to process development lots. Forge has a dedicated research analytics team to support rapid turnaround on process characterization assays.

Let’s Power Your Path Forward
Fit-for-purpose process development tailored to your product and program goals.
Frequently Asked Questions
What is AAV manufacturing process development?
AAV manufacturing process development is the stage in which early research processes are translated into a robust, scalable manufacturing process capable of producing clinical-grade gene therapy vectors. During this phase, scientists optimize upstream production and downstream purification conditions, define critical process parameters, and generate the data needed to support scalable cGMP AAV manufacturing. Effective AAV process development ensures consistent vector yield, product quality, and readiness for clinical manufacturing.
Do I need process development if I am using a CDMO’s AAV platform process?
The right approach depends on your program’s specific goals, timeline, and vector characteristics. A well-designed AAV platform process, like Forge’s FUEL™ platform, is built to accommodate a range of serotypes, transgene designs, and plasmid constructs while already incorporating product-specific optimizations, so many programs can advance efficiently without standalone process development. For some programs, additional process development activities may complement the platform approach to address unique product requirements or specific manufacturing objectives. The best path forward is one that aligns with your program’s needs, and an experienced CDMO partner can help you evaluate which approach, or combination of approaches, sets your program up for success.
What is a Design of Experiments (DoE) in AAV process development?
A Design of Experiments (DoE) is a structured statistical approach used in AAV process development to evaluate how multiple process variables affect manufacturing performance. Instead of testing one parameter at a time, DoE studies assess combinations of factors (such as transfection ratios, DNA concentration, cell density, or chromatography conditions) to identify the optimal settings. This approach accelerates process optimization and helps improve AAV yield, product quality, and reproducibility.
How does AAV process development support cGMP readiness?
AAV process development establishes the process knowledge and control strategy required for successful cGMP manufacturing. Activities such as scale-down modeling, process characterization studies, engineering runs, and analytical method alignment help ensure the manufacturing process performs reliably at production scale. These studies also generate the documentation and data needed to support technology transfer, IND-enabling manufacturing, and future regulatory submissions.
Can process development improve AAV yield and full-to-empty ratios?
Yes. Targeted AAV process development can significantly improve vector yield and full-to-empty capsid ratios by optimizing both upstream and downstream conditions. Upstream optimization (such as adjusting transfection conditions, plasmid ratios, and harvest timing) can increase genome packaging efficiency, while downstream purification strategies (such as chromatography optimization and capsid enrichment methods) can improve recovery of full capsids and overall product quality.
Insights for Developers
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Christopher Shilling represented Forge and the gene therapy manufacturing sector at a recent public meeting hosted by the FDA regarding…
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This article first appeared in Endpoints News and highlights the growing importance of scalable, reliable AAV production as gene therapy…
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Genes of Interest is our employee spotlight showcasing the individuals behind Forge that make our team unique.
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Efficient AAV manufacturing is essential to the success of gene therapy programs, yet scaling it reliably remains complex. This article…